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Naveen Arunachalam
ML Scientist, Nosis Bio

Email: naveen DOT t DOT arun AT gmail DOT com
GitHub: @naveenarun

I am currently an ML Scientist at Nosis Bio. Our mission is to end all chronic disease.

I completed my PhD at MIT in the Kulik Group, where I worked on ML-guided chemical discovery. My PhD research was supported by the NSF, DARPA, and the Office of Naval Research.

Personal Information

  • Ph.D. (MIT) 2023; B.S. (Caltech) 2018

Teaching

Research

I am interested in advancing AI- and ML-accelerated virtual screening of novel therapeutics, whereby safe and effective medicines are rapidly discovered on demand for any disease. I have worked on several areas in the design of novel matter, including:

  • Mathematically calculating the properties of novel molecules using GPUs
    • Database [web] of >100k molecules and their properties
  • Inferring trends and design principles from chemical data [web]
  • Accelerating design by using machine learning to calculate chemical properties in milliseconds (rather than hours, in the case of GPU calculations) [pdf]
  • Reducing the number of GPU calculations needed to train machine learning models [web, web]
  • Helping humans interactively co-create new molecules with trained ML models
    • MolSimplify Lite [web] - design tool for transition metal complexes
    • MOFSimplify [web, pdf] - design tool for metal-organic frameworks
  • Helping humans guide state-of-the-art AI model architectures (transformers), which are used in molecular design [web]